Documents clés
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The following references provide further detail on the topics covered in this course. All links open in a new window/tab. |
Publication de données
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Comment publier des données sur la biodiversité via GBIF.org
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https://www.gbif.org/devenez un éditeur de données[Devenir un éditeur de données avec GBIF^]
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Best Practices for Publishing Biodiversity Data from Environmental Impact Assessments
GBIF Secretariat & IAIA: International Association for Impact Assessment (2020). -
Guidance for private companies to become data publishers through GBIF: Template document to support the internal authorization process to become a GBIF publisher
Rui Figueira, Pedro Beja, Cristina Villaverde, Miguel Vega, Katia Cezón, Tainan Messina, Anne-Sophie Archambeau, Rukaya Johaadien, Dag Endresen & Dairo Escobar (2020). -
Publishing DNA-derived data through biodiversity data platforms
Anders F. Andersson, Andrew Bissett, Anders G. Finstad, Frode Fossøy, Marie Grosjean, Michael Hope, Thomas S. Jeppesen, Urmas Kõljalg, Daniel Lundin, R. Henrik Nilsson, Maria Prager, Cecilie Svenningsen & Dmitry Schigel (2020). -
Pré-requis GBIF sur la qualité des données pour la publication
Publication de données: IPT
Géoréférencement
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Georeferencing Best Practices
Arthur D. Chapman & John R. Wieczorek (2020). -
Georeferencing Quick Reference Guide
Paula F. Zermoglio, Arthur D. Chapman, John R. Wieczorek, Maria Celeste Luna & David A. Bloom (2020). -
Georeferencing Calculator Manual
David A. Bloom, John R. Wieczorek & Paula F. Zermoglio (2020).
OpenRefine
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Guía para la limpieza de datos sobre biodiversidad con OpenRefine
Paula F. Zermoglio, Camila A. Plata Corredor, John R. Wieczorek, Ricardo Ortiz Gallego & Leonardo Buitrago (2021). -
Using Google Refine and taxonomic databases (EOL, NCBI, uBio, WORMS) to clean messy data
iPhylo blog post. Rod Page 2012. -
Reconciling author names using Open Refine and VIAF
iPhylo blog post. Rod Page 2013. -
Validating scientific names with the GBIF Portal web service API
Guest post was written by Gaurav Vaidya, Victoria Tersigni and Robert Guralnick 2013. -
iDigBio Cleaning data with OpenRefine
iDigBio 2013. -
Have We Got the Names “Right”?
Canadensys 2014. -
Cleaning data with OpenRefine
Desmet and Brosens 2016 TDWG. -
EasyOpen Redlist
Querying the IUCN Red List, using a species list, OpenRefine, and some pre-written code. Olly Griffin July 2019.
Qualité
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Principles of Data Quality
Arthur Chapman 2005. -
Principles and Methods of Data Cleaning: Primary Species and Species-Occurrence Data
Arthur Chapman 2005. -
Be careful with dates in Excel
DataOne 2014. -
Guide MVZ d’enregistrement des localités dans les notes de terrain
Espèces sensibles
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Current Best Practices for Generalizing Sensitive Species Occurrence Data
Arthur D. Chapman 2020.